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SRX26407826: Transcriptome of mono-associated gnotobiotic cabbage kimchi
1 ILLUMINA (Illumina NovaSeq 6000) run: 14.5M spots, 4.4G bases, 1.3Gb downloads

Design: Transcriptome of a single lactic acid bacterial strain
Submitted by: World Institute of Kimchi
Study: Transcriptomic Analysis of Fecal Kimchi-Derived Lactic Acid Bacteria Under Varying Environmental Conditions
show Abstracthide Abstract
This dataset comprises transcriptomic raw sequence data from three fecal kimchi-derived lactic acid bacteria species, Lactococcus lactis subsp. lactis CBA3648, Latilactobacillus sakei subsp. sakei CBA3649, and Leuconostoc mesenteroides subsp. mesenteroides CBA3650, under varying conditions. The bacteria were introduced into germ-free kimchi (consisting of Brassica rapa subsp. pekinensis and Raphanus sativus L.), germ-free mice (jejunal-ileum, cecum, and large intestine), and basal media at different temperatures (low and high). Transcriptomic sequencing was carried out using the Illumina NovaSeq 6000 platform.
Sample: B 2-2
SAMN44270194 • SRS22927874 • All experiments • All runs
Library:
Name: B_2_2
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 14.5M spots, 4.4G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR3102065414,504,5224.4G1.3Gb2025-01-06

ID:
35666678

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